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  5. Seita.5G461600.1

Seita.5G461600.1


Description : CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein


Gene families : OG_01_0010322 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010322_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.5G461600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR046342 CBS_dom_sf SUPERFAMILY 44 163
IPR000644 CBS_dom ProSiteProfiles 285 348
IPR046342 CBS_dom_sf Gene3D 31 181
IPR046342 CBS_dom_sf Gene3D 199 346
IPR046342 CBS_dom_sf SUPERFAMILY 222 335
IPR000270 PB1_dom ProSiteProfiles 395 481
IPR000644 CBS_dom ProSiteProfiles 218 277
IPR000270 PB1_dom SMART 397 481
IPR000644 CBS_dom ProSiteProfiles 117 172
IPR000644 CBS_dom ProSiteProfiles 51 109
IPR000270 PB1_dom Pfam 400 479
IPR000644 CBS_dom Pfam 281 323
IPR000644 CBS_dom Pfam 222 267
IPR000644 CBS_dom Pfam 115 161
IPR000644 CBS_dom Pfam 54 99
IPR000644 CBS_dom SMART 120 167
IPR000644 CBS_dom SMART 223 270
IPR000644 CBS_dom SMART 54 102
IPR000644 CBS_dom SMART 288 336
IPR000644 CBS_dom Pfam 54 99
IPR000644 CBS_dom Pfam 222 268
IPR000644 CBS_dom Pfam 115 159
IPR000644 CBS_dom Pfam 281 323
IPR000644 CBS_dom ProSiteProfiles 117 172
IPR000270 PB1_dom Pfam 400 479
IPR000270 PB1_dom SMART 397 481
IPR000644 CBS_dom ProSiteProfiles 218 277
IPR000270 PB1_dom ProSiteProfiles 395 481
IPR000644 CBS_dom ProSiteProfiles 51 109
IPR000644 CBS_dom ProSiteProfiles 285 348
IPR000644 CBS_dom SMART 120 167
IPR000644 CBS_dom SMART 223 270
IPR000644 CBS_dom SMART 54 102
IPR000644 CBS_dom SMART 288 336

No CAZYmes available for this sequence

No external refs found!