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  5. Seita.6G005200.1

Seita.6G005200.1


Description : Protease-associated (PA) RING/U-box zinc finger family protein


Gene families : OG_01_0004272 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004272_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G005200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_136


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001841 Znf_RING Pfam 236 279
IPR044744 ZNRF4/RNF13/RNF167_PA CDD 15 166
IPR001841 Znf_RING SMART 237 278
IPR013083 Znf_RING/FYVE/PHD Gene3D 197 284
IPR046450 PA_dom_sf SUPERFAMILY 84 148
IPR001841 Znf_RING ProSiteProfiles 237 279
IPR003137 PA_domain Pfam 62 144
IPR003137 PA_domain Pfam 64 144
IPR013083 Znf_RING/FYVE/PHD Gene3D 197 284
IPR001841 Znf_RING Pfam 236 279
IPR044744 ZNRF4/RNF13/RNF167_PA CDD 15 166
IPR001841 Znf_RING SMART 237 278
IPR001841 Znf_RING ProSiteProfiles 237 279

No CAZYmes available for this sequence

No external refs found!