Seita.6G022000.1

Description : 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit

Gene families : OG_01_0003505 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003505_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G022000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205

Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042176	regulation of protein catabolic process	ISM	GOs from InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended
CC	GO:1905369	endopeptidase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016024	ARM-type_fold	SUPERFAMILY	13	745
IPR048570	PSMD1_RPN2_N	Pfam	10	274
IPR016642	26S_Psome_Rpn2	PIRSF	4	992
IPR002015	Proteasome/cyclosome_rpt	Pfam	489	522
IPR011989	ARM-like	Gene3D	356	798
IPR040623	RPN2_C	Pfam	798	951
IPR016642	26S_Psome_Rpn2	PIRSF	4	992
IPR016024	ARM-type_fold	SUPERFAMILY	13	745
IPR002015	Proteasome/cyclosome_rpt	Pfam	489	522
IPR011989	ARM-like	Gene3D	356	798
IPR040623	RPN2_C	Pfam	798	951

No CAZYmes available for this sequence

External Links

No external refs found!