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  5. Sevir.6G210500.1

Sevir.6G210500.1


Description : C2H2-type zinc finger family protein


Gene families : OG_01_0001108 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001108_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G210500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G210500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_196
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_35


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0010468 regulation of gene expression ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013087 Znf_C2H2_type ProSitePatterns 246 266
IPR013087 Znf_C2H2_type ProSiteProfiles 244 271
IPR036236 Znf_C2H2_sf SUPERFAMILY 240 266
IPR013087 Znf_C2H2_type SMART 328 348
IPR013087 Znf_C2H2_type SMART 244 266
IPR013087 Znf_C2H2_type SMART 354 377
IPR013087 Znf_C2H2_type ProSiteProfiles 328 348
IPR043584 WIP1/2/3/4/5/6 PANTHER 1 412
IPR036236 Znf_C2H2_sf SUPERFAMILY 312 348

No CAZYmes available for this sequence

No external refs found!