Seita.6G058400.1

Description : Plant VAMP (vesicle-associated membrane protein) family protein

Gene families : OG_01_0014780 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014780_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G058400.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005789	endoplasmic reticulum membrane	ISM	GOs from InterProScan
CC	GO:0016020	membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016763	VAP	PIRSF	1	239
IPR000535	MSP_dom	Pfam	9	112
IPR016763	VAP	PANTHER	8	237
IPR013783	Ig-like_fold	Gene3D	4	131
IPR008962	PapD-like_sf	SUPERFAMILY	4	141
IPR000535	MSP_dom	ProSiteProfiles	8	128
IPR000535	MSP_dom	ProSiteProfiles	8	128
IPR016763	VAP	PANTHER	5	238
IPR000535	MSP_dom	Pfam	9	111
IPR013783	Ig-like_fold	Gene3D	4	131
IPR016763	VAP	PIRSF	1	239
IPR008962	PapD-like_sf	SUPERFAMILY	4	141

No CAZYmes available for this sequence

External Links

No external refs found!