Seita.6G069900.1

Description : Coatomer, beta\' subunit

Gene families : OG_01_0190199 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): No tree available for this family

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G069900.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	28	303
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	178	190
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	631	907
IPR001680	WD40_rpt	SMART	847	884
IPR001680	WD40_rpt	SMART	712	751
IPR001680	WD40_rpt	SMART	627	665
IPR001680	WD40_rpt	SMART	755	802
IPR001680	WD40_rpt	Pfam	714	751
IPR000719	Prot_kinase_dom	ProSiteProfiles	39	310
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	45	71
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	634	928
IPR000719	Prot_kinase_dom	SMART	39	307
IPR000719	Prot_kinase_dom	Pfam	44	300
IPR013783	Ig-like_fold	Gene3D	319	443
IPR001680	WD40_rpt	ProSiteProfiles	719	751
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	178	190
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	28	303
IPR013783	Ig-like_fold	Gene3D	319	443
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	45	71
IPR000719	Prot_kinase_dom	Pfam	44	300
IPR001680	WD40_rpt	SMART	847	884
IPR001680	WD40_rpt	SMART	712	751
IPR001680	WD40_rpt	SMART	627	665
IPR001680	WD40_rpt	SMART	755	802
IPR000719	Prot_kinase_dom	SMART	39	307
IPR001680	WD40_rpt	ProSiteProfiles	719	751
IPR001680	WD40_rpt	Pfam	714	751
IPR000719	Prot_kinase_dom	ProSiteProfiles	39	310
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	634	928
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	631	907

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.6G069900.1

Expression Profile

Co-expression Networks

Functional Annotation