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  5. Seita.6G070100.1

Seita.6G070100.1


Description : terpene synthase 21


Gene families : OG_01_0000295 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000295_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G070100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0010333 terpene synthase activity ISM GOs from InterProScan
MF GO:0016829 lyase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036965 Terpene_synth_N_sf Gene3D 23 179
IPR008930 Terpenoid_cyclase/PrenylTrfase SUPERFAMILY 4 176
IPR005630 Terpene_synthase_metal-bd Pfam 210 452
IPR034741 Terpene_cyclase-like_1_C SFLD 181 461
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 180 461
IPR001906 Terpene_synth_N Pfam 3 153
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 3 461
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 180 461
IPR005630 Terpene_synthase_metal-bd Pfam 184 452
IPR036965 Terpene_synth_N_sf Gene3D 23 179
IPR008930 Terpenoid_cyclase/PrenylTrfase SUPERFAMILY 4 176
IPR034741 Terpene_cyclase-like_1_C SFLD 181 461
IPR001906 Terpene_synth_N Pfam 4 153
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 3 461

No CAZYmes available for this sequence

No external refs found!