Seita.6G079300.1

Description : Mitochondrial transcription termination factor family protein

Gene families : OG_01_0014407 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014407_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G079300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008810	cellulase activity	ISM	GOs from InterProScan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003690	MTERF	PANTHER	111	312
IPR003690	MTERF	Pfam	511	612
IPR003690	MTERF	Pfam	328	493
IPR003690	MTERF	Pfam	217	305
IPR038538	MTERF_sf	Gene3D	359	634
IPR038538	MTERF_sf	Gene3D	160	318
IPR003690	MTERF	SMART	530	561
IPR003690	MTERF	SMART	462	492
IPR003690	MTERF	SMART	495	525
IPR003690	MTERF	SMART	562	595
IPR003690	MTERF	SMART	239	269
IPR000334	Glyco_hydro_45	ProSitePatterns	38	49
IPR003690	MTERF	Pfam	328	493
IPR003690	MTERF	Pfam	511	612
IPR003690	MTERF	Pfam	217	306
IPR038538	MTERF_sf	Gene3D	359	634
IPR038538	MTERF_sf	Gene3D	160	318
IPR000334	Glyco_hydro_45	ProSitePatterns	38	49
IPR003690	MTERF	PANTHER	81	631
IPR003690	MTERF	SMART	530	561
IPR003690	MTERF	SMART	462	492
IPR003690	MTERF	SMART	495	525
IPR003690	MTERF	SMART	562	595
IPR003690	MTERF	SMART	239	269

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.6G079300.1

Expression Profile

Co-expression Networks

Functional Annotation