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  5. Seita.6G084800.1

Seita.6G084800.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0009870 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009870_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G084800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom Pfam 85 143
IPR011992 EF-hand-dom_pair SUPERFAMILY 6 145
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 22 34
IPR002048 EF_hand_dom ProSiteProfiles 80 115
IPR002048 EF_hand_dom Pfam 14 42
IPR002048 EF_hand_dom CDD 85 145
IPR002048 EF_hand_dom SMART 84 112
IPR002048 EF_hand_dom SMART 120 148
IPR002048 EF_hand_dom SMART 13 41
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 93 105
IPR002048 EF_hand_dom ProSiteProfiles 9 44
IPR002048 EF_hand_dom ProSiteProfiles 80 115
IPR002048 EF_hand_dom Pfam 14 41
IPR002048 EF_hand_dom Pfam 85 143
IPR002048 EF_hand_dom CDD 85 145
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 93 105
IPR002048 EF_hand_dom SMART 84 112
IPR002048 EF_hand_dom SMART 120 148
IPR002048 EF_hand_dom SMART 13 41
IPR011992 EF-hand-dom_pair SUPERFAMILY 6 145
IPR002048 EF_hand_dom ProSiteProfiles 9 44
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 22 34

No CAZYmes available for this sequence

No external refs found!