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  5. Seita.6G101600.1

Seita.6G101600.1


Description : vacuolar protein sorting 34


Gene families : OG_01_0003383 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003383_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G101600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202


Type GO Term Name Evidence Source
MF GO:0016301 kinase activity ISM GOs from InterProScan
MF GO:0016303 1-phosphatidylinositol-3-kinase activity ISM GOs from InterProScan
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process ISM GOs from InterProScan
BP GO:0048015 phosphatidylinositol-mediated signaling ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036940 PI3/4_kinase_cat_sf Gene3D 520 697
IPR000403 PI3/4_kinase_cat_dom SMART 434 695
IPR001263 PI3K_accessory_dom Pfam 161 329
IPR008290 PI3K_Vps34 PIRSF 66 280
IPR008290 PI3K_Vps34 PIRSF 276 449
IPR008290 PI3K_Vps34 PIRSF 484 555
IPR008290 PI3K_Vps34 PIRSF 2 81
IPR008290 PI3K_Vps34 PIRSF 558 697
IPR000403 PI3/4_kinase_cat_dom Pfam 560 646
IPR002420 PI3K-type_C2_dom Pfam 8 73
IPR015433 PI_Kinase PANTHER 487 692
IPR011009 Kinase-like_dom_sf SUPERFAMILY 351 689
IPR016024 ARM-type_fold SUPERFAMILY 137 324
IPR001263 PI3K_accessory_dom SMART 153 336
IPR035892 C2_domain_sf SUPERFAMILY 7 65
IPR042236 PI3K_accessory_sf Gene3D 122 325
IPR001263 PI3K_accessory_dom ProSiteProfiles 150 326
IPR000403 PI3/4_kinase_cat_dom ProSiteProfiles 407 682
IPR000403 PI3/4_kinase_cat_dom SMART 434 695
IPR001263 PI3K_accessory_dom Pfam 161 328
IPR000403 PI3/4_kinase_cat_dom ProSiteProfiles 433 696
IPR015433 PI_Kinase PANTHER 5 692
IPR042236 PI3K_accessory_sf Gene3D 122 325
IPR036940 PI3/4_kinase_cat_sf Gene3D 520 697
IPR011009 Kinase-like_dom_sf SUPERFAMILY 351 689
IPR008290 PI3K_Vps34 PIRSF 66 280
IPR008290 PI3K_Vps34 PIRSF 276 449
IPR008290 PI3K_Vps34 PIRSF 484 555
IPR008290 PI3K_Vps34 PIRSF 2 81
IPR008290 PI3K_Vps34 PIRSF 558 697
IPR002420 PI3K-type_C2_dom Pfam 8 73
IPR001263 PI3K_accessory_dom ProSiteProfiles 150 326
IPR035892 C2_domain_sf SUPERFAMILY 7 65
IPR001263 PI3K_accessory_dom SMART 153 336
IPR000403 PI3/4_kinase_cat_dom Pfam 560 645
IPR016024 ARM-type_fold SUPERFAMILY 137 324

No CAZYmes available for this sequence

No external refs found!