Seita.6G185100.1

Description : Predicted AT-hook DNA-binding family protein

Gene families : OG_01_0015499 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015499_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G185100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7

Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005175	PPC_dom	CDD	109	233
IPR014476	AHL15-29	PANTHER	67	276
IPR005175	PPC_dom	ProSiteProfiles	105	257
IPR005175	PPC_dom	Pfam	109	237
IPR005175	PPC_dom	ProSiteProfiles	105	257
IPR005175	PPC_dom	CDD	109	233
IPR014476	AHL15-29	PANTHER	24	315
IPR005175	PPC_dom	Pfam	109	237

No CAZYmes available for this sequence

External Links

No external refs found!