Seita.6G214600.1

Description : C2H2 zinc-finger protein SERRATE (SE)

Gene families : OG_01_0001134 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001134_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G214600.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_183

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007042	SERRATE/Ars2_C	Pfam	362	520
IPR021933	SERRATE/Ars2_N	Pfam	121	203
IPR039727	SE/Ars2	PANTHER	243	635
IPR013087	Znf_C2H2_type	ProSitePatterns	420	443
IPR021933	SERRATE/Ars2_N	Pfam	121	203
IPR007042	SERRATE/Ars2_C	Pfam	363	519
IPR039727	SE/Ars2	PANTHER	1	641
IPR013087	Znf_C2H2_type	ProSitePatterns	420	443

No CAZYmes available for this sequence

External Links

No external refs found!