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  5. Seita.6G243100.1

Seita.6G243100.1


Description : vesicle-associated membrane protein 727


Gene families : OG_01_0014457 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014457_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G243100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001388 Synaptobrevin-like ProSitePatterns 168 187
IPR010908 Longin_dom SMART 31 111
IPR042855 V_SNARE_CC Pfam 149 234
IPR010908 Longin_dom CDD 7 141
IPR010908 Longin_dom ProSiteProfiles 6 115
IPR001388 Synaptobrevin-like PRINTS 175 194
IPR001388 Synaptobrevin-like PRINTS 155 174
IPR001388 Synaptobrevin-like PRINTS 211 230
IPR010908 Longin_dom Pfam 32 103
IPR042855 V_SNARE_CC ProSiteProfiles 150 210
IPR011012 Longin-like_dom_sf SUPERFAMILY 6 98
IPR001388 Synaptobrevin-like ProSitePatterns 168 187
IPR010908 Longin_dom CDD 7 141
IPR010908 Longin_dom ProSiteProfiles 6 115
IPR001388 Synaptobrevin-like PRINTS 175 194
IPR001388 Synaptobrevin-like PRINTS 155 174
IPR001388 Synaptobrevin-like PRINTS 211 230
IPR042855 V_SNARE_CC ProSiteProfiles 150 210
IPR010908 Longin_dom Pfam 32 101
IPR011012 Longin-like_dom_sf SUPERFAMILY 6 98
IPR042855 V_SNARE_CC Pfam 149 234
IPR010908 Longin_dom SMART 31 111

No CAZYmes available for this sequence

No external refs found!