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  5. Seita.6G251600.1

Seita.6G251600.1


Description : copper/zinc superoxide dismutase 2


Gene families : OG_01_0010275 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010275_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G251600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57


Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036423 SOD-like_Cu/Zn_dom_sf Gene3D 47 200
IPR024134 SOD_Cu/Zn_/chaperone PANTHER 12 197
IPR001424 SOD_Cu_Zn_dom CDD 50 193
IPR018152 SOD_Cu/Zn_BS ProSitePatterns 91 101
IPR036423 SOD-like_Cu/Zn_dom_sf SUPERFAMILY 51 198
IPR001424 SOD_Cu_Zn_dom PRINTS 91 113
IPR001424 SOD_Cu_Zn_dom PRINTS 127 136
IPR001424 SOD_Cu_Zn_dom PRINTS 171 197
IPR001424 SOD_Cu_Zn_dom PRINTS 146 168
IPR001424 SOD_Cu_Zn_dom Pfam 62 196
IPR018152 SOD_Cu/Zn_BS ProSitePatterns 185 196
IPR001424 SOD_Cu_Zn_dom PRINTS 91 113
IPR001424 SOD_Cu_Zn_dom PRINTS 127 136
IPR001424 SOD_Cu_Zn_dom PRINTS 171 197
IPR001424 SOD_Cu_Zn_dom PRINTS 146 168
IPR036423 SOD-like_Cu/Zn_dom_sf SUPERFAMILY 51 198
IPR018152 SOD_Cu/Zn_BS ProSitePatterns 91 101
IPR036423 SOD-like_Cu/Zn_dom_sf Gene3D 47 200
IPR001424 SOD_Cu_Zn_dom CDD 50 193
IPR001424 SOD_Cu_Zn_dom Pfam 62 196
IPR018152 SOD_Cu/Zn_BS ProSitePatterns 185 196
IPR024134 SOD_Cu/Zn_/chaperone PANTHER 48 199

No CAZYmes available for this sequence

No external refs found!