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  5. Seita.6G253200.1

Seita.6G253200.1


Description : RING/U-box superfamily protein


Gene families : OG_01_0025540 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025540_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G253200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40


Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
MF GO:0016740 transferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044600 ATL1/ATL16-like PANTHER 162 246
IPR001841 Znf_RING SMART 97 138
IPR013083 Znf_RING/FYVE/PHD Gene3D 54 144
IPR001841 Znf_RING ProSiteProfiles 97 139
IPR001841 Znf_RING Pfam 96 139
IPR001841 Znf_RING ProSiteProfiles 97 139
IPR001841 Znf_RING SMART 97 138
IPR044600 ATL1/ATL16-like PANTHER 172 246
IPR013083 Znf_RING/FYVE/PHD Gene3D 54 144
IPR044600 ATL1/ATL16-like PANTHER 3 148
IPR001841 Znf_RING Pfam 96 139

No CAZYmes available for this sequence

No external refs found!