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  5. Seita.6G254800.1

Seita.6G254800.1


Description : pfkB-like carbohydrate kinase family protein


Gene families : OG_01_0005532 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005532_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.6G254800.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32


Type GO Term Name Evidence Source
MF GO:0016301 kinase activity ISM GOs from InterProScan
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002173 Carboh/pur_kinase_PfkB_CS ProSitePatterns 306 319
IPR029056 Ribokinase-like Gene3D 13 350
IPR002139 Ribo/fructo_kinase PRINTS 43 62
IPR002139 Ribo/fructo_kinase PRINTS 223 234
IPR002139 Ribo/fructo_kinase PRINTS 16 37
IPR029056 Ribokinase-like SUPERFAMILY 14 356
IPR011611 PfkB_dom Pfam 299 353
IPR011611 PfkB_dom Pfam 18 237
IPR011611 PfkB_dom Pfam 299 353
IPR011611 PfkB_dom Pfam 18 237
IPR002173 Carboh/pur_kinase_PfkB_CS ProSitePatterns 306 319
IPR029056 Ribokinase-like SUPERFAMILY 14 356
IPR029056 Ribokinase-like Gene3D 13 350
IPR002139 Ribo/fructo_kinase PRINTS 43 62
IPR002139 Ribo/fructo_kinase PRINTS 223 234
IPR002139 Ribo/fructo_kinase PRINTS 16 37

No CAZYmes available for this sequence

No external refs found!