Sevir.6G230900.1

Description : AGAMOUS-like 42

Gene families : OG_01_0007051 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007051_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G230900.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G230900.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_142
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_150

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002100	TF_MADSbox	Pfam	34	81
IPR036879	TF_MADSbox_sf	Gene3D	38	108
IPR002100	TF_MADSbox	SMART	25	84
IPR002100	TF_MADSbox	ProSiteProfiles	25	85
IPR002100	TF_MADSbox	PRINTS	27	47
IPR002100	TF_MADSbox	PRINTS	62	83
IPR002100	TF_MADSbox	PRINTS	47	62
IPR036879	TF_MADSbox_sf	SUPERFAMILY	27	101

No CAZYmes available for this sequence

External Links

No external refs found!