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  5. Seita.7G022300.1

Seita.7G022300.1


Description : Signal transduction histidine kinase, hybrid-type, ethylene sensor


Gene families : OG_01_0009449 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009449_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G022300.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81


Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity ISM GOs from InterProScan
BP GO:0000160 phosphorelay signal transduction system ISM GOs from InterProScan
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005789 endoplasmic reticulum membrane ISM GOs from InterProScan
BP GO:0007165 signal transduction ISM GOs from InterProScan
BP GO:0009723 response to ethylene ISM GOs from InterProScan
MF GO:0038199 ethylene receptor activity ISM GOs from InterProScan
MF GO:0051740 ethylene binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014525 ETR PIRSF 12 767
IPR001789 Sig_transdc_resp-reg_receiver Pfam 647 756
IPR003661 HisK_dim/P SMART 381 446
IPR003018 GAF Pfam 196 345
IPR036890 HATPase_C_sf Gene3D 447 623
IPR029016 GAF-like_dom_sf Gene3D 174 346
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 646 764
IPR036890 HATPase_C_sf SUPERFAMILY 435 617
IPR003018 GAF SMART 196 355
IPR036097 HisK_dim/P_sf SUPERFAMILY 367 446
IPR005467 His_kinase_dom ProSiteProfiles 388 621
IPR001789 Sig_transdc_resp-reg_receiver SMART 645 760
IPR011006 CheY-like_superfamily SUPERFAMILY 641 765
IPR036890 HATPase_C_sf SUPERFAMILY 435 617
IPR014525 ETR PIRSF 12 767
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 646 764
IPR036097 HisK_dim/P_sf SUPERFAMILY 367 446
IPR029016 GAF-like_dom_sf Gene3D 174 346
IPR003661 HisK_dim/P SMART 381 446
IPR001789 Sig_transdc_resp-reg_receiver Pfam 647 756
IPR011006 CheY-like_superfamily SUPERFAMILY 641 765
IPR003018 GAF Pfam 196 345
IPR001789 Sig_transdc_resp-reg_receiver SMART 645 760
IPR003018 GAF SMART 196 355
IPR005467 His_kinase_dom ProSiteProfiles 388 621
IPR036890 HATPase_C_sf Gene3D 447 623

No CAZYmes available for this sequence

No external refs found!