1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.7G028600.1

Seita.7G028600.1


Description : cleavage and polyadenylation specificity factor 160


Gene families : OG_01_0008634 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008634_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G028600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 1079 1217
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 1219 1343
IPR018846 Cleavage/polyA-sp_fac_asu_N Pfam 182 689
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1220 1285
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 966 1219
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 59 444
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 59 444
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1220 1285
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 966 1219
IPR018846 Cleavage/polyA-sp_fac_asu_N Pfam 182 668
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 1079 1217
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 1219 1343

No CAZYmes available for this sequence

No external refs found!