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  5. Seita.7G030200.1

Seita.7G030200.1


Description : acetyl-CoA carboxylase 1


Gene families : OG_01_0000499 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000499_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G030200.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_256


Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006633 fatty acid biosynthetic process ISM GOs from InterProScan
MF GO:0016874 ligase activity ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005482 Biotin_COase_C SMART 527 634
IPR049074 ACCA_BT Pfam 650 765
IPR049076 ACCA PANTHER 102 2319
IPR005482 Biotin_COase_C Pfam 528 634
IPR011764 Biotin_carboxylation_dom ProSiteProfiles 131 638
IPR011763 COA_CT_C ProSiteProfiles 1902 2218
IPR029045 ClpP/crotonase-like_dom_sf SUPERFAMILY 1892 2284
IPR000089 Biotin_lipoyl Pfam 782 838
IPR029045 ClpP/crotonase-like_dom_sf SUPERFAMILY 1563 1888
IPR005479 CbamoylP_synth_lsu-like_ATP-bd ProSitePatterns 445 452
IPR000089 Biotin_lipoyl ProSiteProfiles 765 839
IPR013815 ATP_grasp_subdomain_1 Gene3D 299 361
IPR011761 ATP-grasp ProSiteProfiles 284 478
IPR005479 CbamoylP_synth_lsu-like_ATP-bd Pfam 298 481
IPR011762 COA_CT_N ProSiteProfiles 1557 1898
IPR013537 AcCoA_COase_cen Pfam 839 1546
IPR016185 PreATP-grasp_dom_sf SUPERFAMILY 101 254
IPR011053 Single_hybrid_motif SUPERFAMILY 771 841
IPR034733 AcCoA_carboxyl_beta Pfam 1655 2207
IPR005481 BC-like_N Pfam 132 251
IPR011054 Rudment_hybrid_motif SUPERFAMILY 522 635
IPR034733 AcCoA_carboxyl_beta Pfam 1654 2207
IPR005482 Biotin_COase_C SMART 527 634
IPR011762 COA_CT_N ProSiteProfiles 1557 1898
IPR011763 COA_CT_C ProSiteProfiles 1902 2218
IPR013537 AcCoA_COase_cen Pfam 839 1550
IPR005481 BC-like_N Pfam 132 251
IPR011053 Single_hybrid_motif SUPERFAMILY 771 841
IPR011761 ATP-grasp ProSiteProfiles 284 478
IPR011054 Rudment_hybrid_motif SUPERFAMILY 522 635
IPR005479 CbamoylP_synth_lsu-like_ATP-bd Pfam 298 481
IPR000089 Biotin_lipoyl ProSiteProfiles 765 839
IPR000089 Biotin_lipoyl Pfam 782 838
IPR016185 PreATP-grasp_dom_sf SUPERFAMILY 101 254
IPR029045 ClpP/crotonase-like_dom_sf SUPERFAMILY 1892 2284
IPR029045 ClpP/crotonase-like_dom_sf SUPERFAMILY 1563 1888
IPR013815 ATP_grasp_subdomain_1 Gene3D 299 361
IPR011764 Biotin_carboxylation_dom ProSiteProfiles 131 638
IPR005482 Biotin_COase_C Pfam 528 634
IPR005479 CbamoylP_synth_lsu-like_ATP-bd ProSitePatterns 445 452

No CAZYmes available for this sequence

No external refs found!