Seita.7G042300.1

Description : cycloartenol synthase 1

Gene families : OG_01_0000010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000010_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G042300.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_256

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005811	lipid droplet	ISM	GOs from InterProScan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	ISM	GOs from InterProScan
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018333	Squalene_cyclase	PANTHER	2	430
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	11	430
IPR018333	Squalene_cyclase	NCBIfam	16	427
IPR002365	Terpene_synthase_CS	ProSitePatterns	281	295
IPR032696	SQ_cyclase_C	Pfam	95	427
IPR032696	SQ_cyclase_C	Pfam	95	427
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	11	430
IPR002365	Terpene_synthase_CS	ProSitePatterns	281	295
IPR018333	Squalene_cyclase	TIGRFAM	16	427
IPR018333	Squalene_cyclase	PANTHER	3	433

No CAZYmes available for this sequence

External Links

No external refs found!