Seita.7G043100.1

Description : LRR and NB-ARC domains-containing disease resistance protein

Gene families : OG_01_0000973 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000973_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G043100.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036388	WH-like_DNA-bd_sf	Gene3D	442	524
IPR044974	Disease_R_plants	PANTHER	37	1001
IPR027417	P-loop_NTPase	Gene3D	181	346
IPR032675	LRR_dom_sf	Gene3D	1121	1239
IPR032675	LRR_dom_sf	Gene3D	759	945
IPR032675	LRR_dom_sf	Gene3D	976	1083
IPR042197	Apaf_helical	Gene3D	350	440
IPR032675	LRR_dom_sf	Gene3D	624	758
IPR041118	Rx_N	Pfam	14	89
IPR027417	P-loop_NTPase	SUPERFAMILY	177	450
IPR032675	LRR_dom_sf	Gene3D	1240	1411
IPR002182	NB-ARC	Pfam	215	437
IPR002182	NB-ARC	Pfam	216	437
IPR041118	Rx_N	Pfam	14	89
IPR036388	WH-like_DNA-bd_sf	Gene3D	442	524
IPR032675	LRR_dom_sf	Gene3D	1240	1411
IPR032675	LRR_dom_sf	Gene3D	624	758
IPR032675	LRR_dom_sf	Gene3D	759	945
IPR032675	LRR_dom_sf	Gene3D	1121	1239
IPR032675	LRR_dom_sf	Gene3D	976	1083
IPR027417	P-loop_NTPase	SUPERFAMILY	177	450
IPR042197	Apaf_helical	Gene3D	350	440
IPR027417	P-loop_NTPase	Gene3D	181	346
IPR044974	Disease_R_plants	PANTHER	5	1335

No CAZYmes available for this sequence

External Links

No external refs found!