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  5. Seita.7G080100.1

Seita.7G080100.1


Description : MEI2-like protein 1


Gene families : OG_01_0002469 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002469_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G080100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_123


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 346 439
IPR035979 RBD_domain_sf SUPERFAMILY 261 418
IPR000504 RRM_dom ProSiteProfiles 264 337
IPR035979 RBD_domain_sf SUPERFAMILY 818 902
IPR000504 RRM_dom ProSiteProfiles 348 421
IPR007201 Mei2-like_Rrm_C Pfam 816 912
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 257 336
IPR034454 MEI2-like_RRM3 CDD 819 904
IPR000504 RRM_dom Pfam 266 330
IPR000504 RRM_dom Pfam 353 415
IPR000504 RRM_dom SMART 265 333
IPR000504 RRM_dom SMART 350 417
IPR000504 RRM_dom SMART 818 894
IPR034453 MEI2-like_RRM1 CDD 263 339
IPR034453 MEI2-like_RRM1 CDD 263 339
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 346 439
IPR035979 RBD_domain_sf SUPERFAMILY 818 902
IPR000504 RRM_dom ProSiteProfiles 348 421
IPR035979 RBD_domain_sf SUPERFAMILY 261 418
IPR000504 RRM_dom ProSiteProfiles 264 337
IPR000504 RRM_dom SMART 265 333
IPR000504 RRM_dom SMART 350 417
IPR000504 RRM_dom SMART 818 894
IPR007201 Mei2-like_Rrm_C Pfam 816 912
IPR000504 RRM_dom Pfam 353 415
IPR000504 RRM_dom Pfam 266 330
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 257 336
IPR034454 MEI2-like_RRM3 CDD 819 904

No CAZYmes available for this sequence

No external refs found!