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  5. Sevir.6G237300.1

Sevir.6G237300.1


Description : disease resistance family protein / LRR family protein


Gene families : OG_01_0000331 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000331_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G237300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G237300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_36
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_148


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013210 LRR_N_plant-typ Pfam 31 66
IPR032675 LRR_dom_sf Gene3D 28 200
IPR032675 LRR_dom_sf Gene3D 201 315
IPR032675 LRR_dom_sf Gene3D 316 419
IPR003591 Leu-rich_rpt_typical-subtyp SMART 93 118
IPR003591 Leu-rich_rpt_typical-subtyp SMART 344 367
IPR003591 Leu-rich_rpt_typical-subtyp SMART 558 582
IPR003591 Leu-rich_rpt_typical-subtyp SMART 655 679
IPR003591 Leu-rich_rpt_typical-subtyp SMART 320 343
IPR003591 Leu-rich_rpt_typical-subtyp SMART 606 629
IPR003591 Leu-rich_rpt_typical-subtyp SMART 776 800
IPR003591 Leu-rich_rpt_typical-subtyp SMART 268 292
IPR003591 Leu-rich_rpt_typical-subtyp SMART 824 847
IPR003591 Leu-rich_rpt_typical-subtyp SMART 490 513
IPR001611 Leu-rich_rpt Pfam 468 490
IPR001611 Leu-rich_rpt Pfam 246 268
IPR032675 LRR_dom_sf Gene3D 511 879
IPR001611 Leu-rich_rpt Pfam 755 813
IPR032675 LRR_dom_sf Gene3D 420 510

No CAZYmes available for this sequence

No external refs found!