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  5. Seita.7G137000.1

Seita.7G137000.1


Description : ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein


Gene families : OG_01_0003847 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003847_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G137000.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000270 PB1_dom Pfam 25 106
IPR000433 Znf_ZZ SMART 450 493
IPR000433 Znf_ZZ Pfam 451 486
IPR000270 PB1_dom ProSiteProfiles 23 108
IPR000433 Znf_ZZ ProSiteProfiles 451 501
IPR043145 Znf_ZZ_sf Gene3D 447 500
IPR032350 N_BRCA1_central CDD 517 628
IPR013783 Ig-like_fold Gene3D 513 632
IPR000270 PB1_dom SMART 23 108
IPR032350 N_BRCA1_central Pfam 525 627
IPR000270 PB1_dom Pfam 25 106
IPR000270 PB1_dom SMART 23 108
IPR000433 Znf_ZZ ProSiteProfiles 450 497
IPR000270 PB1_dom ProSiteProfiles 23 108
IPR032350 N_BRCA1_central Pfam 525 627
IPR000433 Znf_ZZ SMART 450 493
IPR013783 Ig-like_fold Gene3D 513 632
IPR032350 N_BRCA1_central CDD 517 628
IPR043145 Znf_ZZ_sf Gene3D 447 500
IPR000433 Znf_ZZ Pfam 451 486

No CAZYmes available for this sequence

No external refs found!