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  5. Seita.7G160500.1

Seita.7G160500.1


Description : CLIP-associated protein


Gene families : OG_01_0004007 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004007_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G160500.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011989 ARM-like Gene3D 266 506
IPR016024 ARM-type_fold SUPERFAMILY 5 401
IPR016024 ARM-type_fold SUPERFAMILY 292 1434
IPR021133 HEAT_type_2 ProSiteProfiles 161 199
IPR024395 CLASP_N_dom Pfam 285 500
IPR011989 ARM-like Gene3D 801 1023
IPR048491 XMAP215_CLASP_TOG Pfam 14 214
IPR011989 ARM-like Gene3D 1219 1435
IPR011989 ARM-like Gene3D 1 223
IPR034085 TOG SMART 1209 1436
IPR034085 TOG SMART 270 513
IPR034085 TOG SMART 2 225
IPR034085 TOG SMART 786 1028
IPR011989 ARM-like Gene3D 266 506
IPR024395 CLASP_N_dom Pfam 285 500
IPR016024 ARM-type_fold SUPERFAMILY 5 401
IPR011989 ARM-like Gene3D 1219 1435
IPR011989 ARM-like Gene3D 1 223
IPR000357 HEAT Pfam 161 190
IPR016024 ARM-type_fold SUPERFAMILY 292 1434
IPR034085 TOG SMART 1209 1436
IPR034085 TOG SMART 270 513
IPR034085 TOG SMART 2 225
IPR034085 TOG SMART 786 1028
IPR011989 ARM-like Gene3D 801 1023
IPR021133 HEAT_type_2 ProSiteProfiles 161 199

No CAZYmes available for this sequence

No external refs found!