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  5. Sevir.6G245600.1

Sevir.6G245600.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G245600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G245600.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_596
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_115


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017949 Thaumatin_CS ProSitePatterns 92 108
IPR037176 Osmotin/thaumatin-like_sf Gene3D 30 244
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 31 245
IPR001938 Thaumatin PRINTS 234 243
IPR001938 Thaumatin PRINTS 79 90
IPR001938 Thaumatin PRINTS 31 43
IPR001938 Thaumatin PRINTS 131 147
IPR001938 Thaumatin ProSiteProfiles 31 244
IPR001938 Thaumatin PANTHER 6 267
IPR001938 Thaumatin SMART 32 244
IPR001938 Thaumatin Pfam 36 244
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 317 1.5e-90 36 244
No external refs found!