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Description : WD-40 repeat family protein / beige-related
Gene families : OG_01_0002385 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002385_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G193500.1 | |
| Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000409 | BEACH_dom | Pfam | 2157 | 2433 |
| IPR023362 | PH-BEACH_dom | Pfam | 2031 | 2129 |
| IPR023362 | PH-BEACH_dom | ProSiteProfiles | 2018 | 2129 |
| IPR000409 | BEACH_dom | CDD | 2156 | 2433 |
| IPR000409 | BEACH_dom | SMART | 2156 | 2433 |
| IPR031570 | NBEA/BDCP_DUF4704 | Pfam | 565 | 894 |
| IPR031570 | NBEA/BDCP_DUF4704 | Pfam | 1075 | 1187 |
| IPR000409 | BEACH_dom | ProSiteProfiles | 2144 | 2433 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 2587 | 2628 |
| IPR011993 | PH-like_dom_sf | Gene3D | 2021 | 2128 |
| IPR036372 | BEACH_dom_sf | Gene3D | 2145 | 2433 |
| IPR013320 | ConA-like_dom_sf | SUPERFAMILY | 274 | 499 |
| IPR001680 | WD40_rpt | SMART | 2664 | 2703 |
| IPR001680 | WD40_rpt | SMART | 2829 | 2869 |
| IPR001680 | WD40_rpt | SMART | 2580 | 2619 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 2546 | 2880 |
| IPR046851 | NBCH_WD40 | Pfam | 2487 | 2774 |
| IPR023362 | PH-BEACH_dom | CDD | 2021 | 2129 |
| IPR036372 | BEACH_dom_sf | SUPERFAMILY | 2147 | 2433 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 2555 | 2868 |
| IPR000409 | BEACH_dom | ProSiteProfiles | 2144 | 2433 |
| IPR036372 | BEACH_dom_sf | Gene3D | 2145 | 2433 |
| IPR000409 | BEACH_dom | Pfam | 2157 | 2433 |
| IPR036372 | BEACH_dom_sf | SUPERFAMILY | 2147 | 2433 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 2555 | 2868 |
| IPR000409 | BEACH_dom | SMART | 2156 | 2433 |
| IPR011993 | PH-like_dom_sf | Gene3D | 2021 | 2128 |
| IPR013320 | ConA-like_dom_sf | SUPERFAMILY | 274 | 499 |
| IPR031570 | NBEA/BDCP_DUF4704 | Pfam | 571 | 850 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 2546 | 2880 |
| IPR023362 | PH-BEACH_dom | ProSiteProfiles | 2018 | 2129 |
| IPR001680 | WD40_rpt | SMART | 2664 | 2703 |
| IPR001680 | WD40_rpt | SMART | 2829 | 2869 |
| IPR001680 | WD40_rpt | SMART | 2580 | 2619 |
| IPR023362 | PH-BEACH_dom | Pfam | 2031 | 2129 |
| IPR023362 | PH-BEACH_dom | CDD | 2021 | 2129 |
| IPR001680 | WD40_rpt | Pfam | 2587 | 2618 |
| IPR001680 | WD40_rpt | Pfam | 2667 | 2694 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 2587 | 2628 |
| IPR000409 | BEACH_dom | CDD | 2156 | 2433 |
No CAZYmes available for this sequence
| No external refs found! |