Seita.7G198000.1

Description : mechanosensitive channel of small conductance-like 5

Gene families : OG_01_0001740 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001740_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G198000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR010920	LSM_dom_sf	SUPERFAMILY	744	803
IPR023408	MscS_beta-dom_sf	Gene3D	754	803
IPR016688	MscS-like_plants/fungi	PANTHER	28	927
IPR006685	MscS_channel_2nd	Pfam	747	804
IPR016688	MscS-like_plants/fungi	PIRSF	27	928
IPR023408	MscS_beta-dom_sf	Gene3D	754	803
IPR016688	MscS-like_plants/fungi	PANTHER	1	929
IPR006685	MscS_channel_2nd	Pfam	696	898
IPR016688	MscS-like_plants/fungi	PIRSF	27	928
IPR010920	LSM_dom_sf	SUPERFAMILY	744	803

No CAZYmes available for this sequence

External Links

No external refs found!