Seita.7G231900.1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0000162 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000162_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G231900.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001965	Znf_PHD	SMART	704	750
IPR039187	SNO_AAA	Pfam	224	524
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	705	749
IPR019787	Znf_PHD-finger	Pfam	705	749
IPR027417	P-loop_NTPase	SUPERFAMILY	243	468
IPR026937	SBNO_Helicase_C_dom	Pfam	792	1079
IPR027417	P-loop_NTPase	Gene3D	252	453
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	691	751
IPR013083	Znf_RING/FYVE/PHD	Gene3D	645	764
IPR026741	SNO	PANTHER	28	1299
IPR019787	Znf_PHD-finger	ProSiteProfiles	702	752
IPR027417	P-loop_NTPase	SUPERFAMILY	847	952
IPR026741	SNO	PANTHER	9	1301
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	705	749
IPR001965	Znf_PHD	SMART	704	750
IPR039187	SNO_AAA	Pfam	224	524
IPR019787	Znf_PHD-finger	Pfam	704	750
IPR013083	Znf_RING/FYVE/PHD	Gene3D	645	764
IPR027417	P-loop_NTPase	SUPERFAMILY	243	468
IPR026937	SBNO_Helicase_C_dom	Pfam	792	1079
IPR019787	Znf_PHD-finger	ProSiteProfiles	702	752
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	691	751
IPR027417	P-loop_NTPase	Gene3D	252	453
IPR027417	P-loop_NTPase	SUPERFAMILY	847	952

No CAZYmes available for this sequence

External Links

No external refs found!