Seita.7G238600.1

Description : peroxin 6

Gene families : OG_01_0003415 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003415_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G238600.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027417	P-loop_NTPase	Gene3D	647	925
IPR003960	ATPase_AAA_CS	ProSitePatterns	792	810
IPR047533	RecA-like_PEX6_r2	CDD	661	820
IPR027417	P-loop_NTPase	Gene3D	339	553
IPR003959	ATPase_AAA_core	Pfam	373	529
IPR003959	ATPase_AAA_core	Pfam	689	821
IPR003593	AAA+_ATPase	SMART	367	534
IPR003593	AAA+_ATPase	SMART	685	824
IPR027417	P-loop_NTPase	SUPERFAMILY	345	601
IPR027417	P-loop_NTPase	SUPERFAMILY	648	929
IPR003960	ATPase_AAA_CS	ProSitePatterns	792	810
IPR041569	AAA_lid_3	Pfam	845	882
IPR027417	P-loop_NTPase	SUPERFAMILY	648	929
IPR027417	P-loop_NTPase	Gene3D	647	925
IPR027417	P-loop_NTPase	SUPERFAMILY	345	601
IPR003959	ATPase_AAA_core	Pfam	689	821
IPR003959	ATPase_AAA_core	Pfam	373	528
IPR027417	P-loop_NTPase	Gene3D	339	553
IPR003593	AAA+_ATPase	SMART	367	534
IPR003593	AAA+_ATPase	SMART	685	824

No CAZYmes available for this sequence

External Links

No external refs found!