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  5. Seita.7G241100.1

Seita.7G241100.1


Description : multidrug resistance-associated protein 2


Gene families : OG_01_0004012 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004012_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G241100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003439 ABC_transporter-like_ATP-bd Pfam 635 772
IPR003593 AAA+_ATPase SMART 1272 1465
IPR003593 AAA+_ATPase SMART 644 820
IPR027417 P-loop_NTPase SUPERFAMILY 615 842
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 1246 1480
IPR036640 ABC1_TM_sf SUPERFAMILY 923 1226
IPR027417 P-loop_NTPase SUPERFAMILY 1237 1479
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 617 843
IPR011527 ABC1_TM_dom ProSiteProfiles 306 585
IPR017871 ABC_transporter-like_CS ProSitePatterns 1383 1397
IPR017871 ABC_transporter-like_CS ProSitePatterns 745 759
IPR011527 ABC1_TM_dom ProSiteProfiles 927 1209
IPR036640 ABC1_TM_sf Gene3D 285 602
IPR036640 ABC1_TM_sf Gene3D 890 1227
IPR011527 ABC1_TM_dom Pfam 927 1172
IPR011527 ABC1_TM_dom Pfam 306 573
IPR044746 ABCC_6TM_D1 CDD 307 592
IPR044726 ABCC_6TM_D2 CDD 925 1221
IPR027417 P-loop_NTPase Gene3D 611 870
IPR003439 ABC_transporter-like_ATP-bd Pfam 1263 1411
IPR036640 ABC1_TM_sf SUPERFAMILY 289 597
IPR027417 P-loop_NTPase Gene3D 1230 1482
IPR036640 ABC1_TM_sf Gene3D 285 602
IPR036640 ABC1_TM_sf Gene3D 890 1227
IPR017871 ABC_transporter-like_CS ProSitePatterns 1383 1397
IPR017871 ABC_transporter-like_CS ProSitePatterns 745 759
IPR027417 P-loop_NTPase SUPERFAMILY 615 842
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 617 843
IPR027417 P-loop_NTPase Gene3D 1230 1482
IPR036640 ABC1_TM_sf SUPERFAMILY 923 1226
IPR003593 AAA+_ATPase SMART 1272 1465
IPR003593 AAA+_ATPase SMART 644 820
IPR027417 P-loop_NTPase SUPERFAMILY 1237 1479
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 1246 1480
IPR011527 ABC1_TM_dom ProSiteProfiles 927 1209
IPR036640 ABC1_TM_sf SUPERFAMILY 289 597
IPR044726 ABCC_6TM_D2 CDD 925 1221
IPR044746 ABCC_6TM_D1 CDD 307 592
IPR011527 ABC1_TM_dom Pfam 306 573
IPR011527 ABC1_TM_dom Pfam 926 1172
IPR003439 ABC_transporter-like_ATP-bd Pfam 635 772
IPR011527 ABC1_TM_dom ProSiteProfiles 306 585
IPR027417 P-loop_NTPase Gene3D 611 870
IPR003439 ABC_transporter-like_ATP-bd Pfam 1263 1411

No CAZYmes available for this sequence

No external refs found!