Seita.7G248800.1

Description : ARM repeat superfamily protein

Gene families : OG_01_0004479 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004479_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G248800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205

Type	GO Term	Name	Evidence	Source
BP	GO:0000054	ribosomal subunit export from nucleus	None	Extended
BP	GO:0000055	ribosomal large subunit export from nucleus	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0031503	protein-containing complex localization	None	Extended
BP	GO:0033750	ribosome localization	None	Extended
BP	GO:0042273	ribosomal large subunit biogenesis	ISM	GOs from InterProScan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR048292	SDA1_C	Pfam	791	836
IPR027312	Sda1	PANTHER	17	827
IPR007949	SDA1_MD	Pfam	604	772
IPR012977	SDA1_N	Pfam	88	462
IPR016024	ARM-type_fold	SUPERFAMILY	86	485
IPR012977	SDA1_N	Pfam	88	139
IPR027312	Sda1	PANTHER	24	838
IPR016024	ARM-type_fold	SUPERFAMILY	86	485
IPR007949	SDA1_MD	Pfam	448	835

No CAZYmes available for this sequence

External Links

No external refs found!