Seita.7G287800.1

Description : Polynucleotide adenylyltransferase family protein

Gene families : OG_01_0002334 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002334_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.7G287800.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	ISM	GOs from InterProScan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032828	PolyA_RNA-bd	Pfam	266	324
IPR002646	PolA_pol_head_dom	Pfam	100	237
IPR002646	PolA_pol_head_dom	CDD	77	234
IPR043519	NT_sf	SUPERFAMILY	77	234
IPR000626	Ubiquitin-like_dom	ProSiteProfiles	419	473
IPR043519	NT_sf	Gene3D	64	233
IPR000626	Ubiquitin-like_dom	ProSiteProfiles	419	473
IPR002646	PolA_pol_head_dom	Pfam	100	237
IPR043519	NT_sf	SUPERFAMILY	77	234
IPR002646	PolA_pol_head_dom	CDD	77	234
IPR032828	PolyA_RNA-bd	Pfam	266	324
IPR043519	NT_sf	Gene3D	64	233

No CAZYmes available for this sequence

External Links

No external refs found!