Sevir.6G258100.1

Description : zinc finger (C2H2 type) family protein

Gene families : OG_01_0014779 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014779_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.6G258100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.6G258100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_21

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR022755	Znf_C2H2_jaz	Pfam	63	89
IPR003604	Matrin/U1-like-C_Znf_C2H2	SMART	61	95
IPR036236	Znf_C2H2_sf	SUPERFAMILY	50	115
IPR013087	Znf_C2H2_type	ProSitePatterns	66	88

No CAZYmes available for this sequence

External Links

No external refs found!