Seita.8G039500.1

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_01_0003642 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003642_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G039500.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041118	Rx_N	Pfam	7	84
IPR041118	Rx_N	Pfam	1289	1376
IPR032675	LRR_dom_sf	Gene3D	761	914
IPR044974	Disease_R_plants	PANTHER	21	907
IPR027417	P-loop_NTPase	Gene3D	155	326
IPR003593	AAA+_ATPase	SMART	193	331
IPR003593	AAA+_ATPase	SMART	1473	1636
IPR032675	LRR_dom_sf	Gene3D	1815	2178
IPR003441	NAC-dom	ProSiteProfiles	1040	1200
IPR027417	P-loop_NTPase	SUPERFAMILY	155	431
IPR036093	NAC_dom_sf	Gene3D	1049	1203
IPR002182	NB-ARC	Pfam	191	417
IPR002182	NB-ARC	Pfam	1458	1694
IPR032675	LRR_dom_sf	Gene3D	517	734
IPR036093	NAC_dom_sf	SUPERFAMILY	1036	1199
IPR042197	Apaf_helical	Gene3D	1612	1695
IPR042197	Apaf_helical	Gene3D	330	416
IPR027417	P-loop_NTPase	Gene3D	1442	1605
IPR036388	WH-like_DNA-bd_sf	Gene3D	417	507
IPR036388	WH-like_DNA-bd_sf	Gene3D	1696	1785
IPR027417	P-loop_NTPase	SUPERFAMILY	1440	1710
IPR038005	RX-like_CC	CDD	4	132
IPR003441	NAC-dom	Pfam	1041	1171
IPR036388	WH-like_DNA-bd_sf	Gene3D	417	507
IPR036388	WH-like_DNA-bd_sf	Gene3D	1696	1785
IPR027417	P-loop_NTPase	SUPERFAMILY	155	431
IPR027417	P-loop_NTPase	Gene3D	1442	1605
IPR003593	AAA+_ATPase	SMART	193	331
IPR003593	AAA+_ATPase	SMART	1473	1636
IPR036093	NAC_dom_sf	Gene3D	1049	1203
IPR032675	LRR_dom_sf	Gene3D	517	734
IPR027417	P-loop_NTPase	SUPERFAMILY	1440	1710
IPR044974	Disease_R_plants	PANTHER	9	976
IPR042197	Apaf_helical	Gene3D	1612	1695
IPR042197	Apaf_helical	Gene3D	330	416
IPR003441	NAC-dom	Pfam	1041	1171
IPR032675	LRR_dom_sf	Gene3D	761	914
IPR036093	NAC_dom_sf	SUPERFAMILY	1036	1199
IPR038005	RX-like_CC	CDD	1286	1390
IPR038005	RX-like_CC	CDD	4	132
IPR041118	Rx_N	Pfam	7	84
IPR041118	Rx_N	Pfam	1289	1377
IPR002182	NB-ARC	Pfam	1457	1694
IPR002182	NB-ARC	Pfam	190	417
IPR027417	P-loop_NTPase	Gene3D	155	326
IPR032675	LRR_dom_sf	Gene3D	1815	2178
IPR003441	NAC-dom	ProSiteProfiles	1040	1200
IPR044974	Disease_R_plants	PANTHER	1291	2181

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.8G039500.1

Expression Profile

Co-expression Networks

Functional Annotation