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  5. Seita.8G043100.1

Seita.8G043100.1


Description : actin 7


Gene families : OG_01_0000039 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000039_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G043100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020902 Actin/actin-like_CS ProSitePatterns 106 118
IPR043129 ATPase_NBD SUPERFAMILY 6 155
IPR004000 Actin Pfam 5 377
IPR043129 ATPase_NBD SUPERFAMILY 149 377
IPR004001 Actin_CS ProSitePatterns 358 366
IPR004000 Actin PRINTS 51 62
IPR004000 Actin PRINTS 238 254
IPR004000 Actin PRINTS 63 85
IPR004000 Actin PRINTS 142 161
IPR004000 Actin PRINTS 28 37
IPR004000 Actin PRINTS 117 130
IPR004000 Actin PANTHER 8 369
IPR004000 Actin SMART 7 377
IPR004001 Actin_CS ProSitePatterns 55 65
IPR004000 Actin Pfam 5 377
IPR043129 ATPase_NBD SUPERFAMILY 6 155
IPR004001 Actin_CS ProSitePatterns 55 65
IPR020902 Actin/actin-like_CS ProSitePatterns 106 118
IPR043129 ATPase_NBD SUPERFAMILY 149 377
IPR004000 Actin PRINTS 51 62
IPR004000 Actin PRINTS 238 254
IPR004000 Actin PRINTS 63 85
IPR004000 Actin PRINTS 142 161
IPR004000 Actin PRINTS 28 37
IPR004000 Actin PRINTS 117 130
IPR004000 Actin SMART 7 377
IPR004000 Actin PANTHER 1 376
IPR004001 Actin_CS ProSitePatterns 358 366

No CAZYmes available for this sequence

No external refs found!