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  5. Seita.8G049500.1

Seita.8G049500.1


Description : CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein


Gene families : OG_01_0002205 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002205_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G049500.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000644 CBS_dom ProSiteProfiles 64 121
IPR000644 CBS_dom ProSiteProfiles 130 185
IPR000270 PB1_dom ProSiteProfiles 411 497
IPR000270 PB1_dom Pfam 414 496
IPR000644 CBS_dom Pfam 126 171
IPR000644 CBS_dom Pfam 294 335
IPR000644 CBS_dom Pfam 234 282
IPR000644 CBS_dom Pfam 66 113
IPR000644 CBS_dom ProSiteProfiles 298 357
IPR046342 CBS_dom_sf Gene3D 44 195
IPR046342 CBS_dom_sf Gene3D 223 358
IPR000270 PB1_dom SMART 413 497
IPR000644 CBS_dom SMART 67 115
IPR000644 CBS_dom SMART 236 283
IPR000644 CBS_dom SMART 301 349
IPR000644 CBS_dom SMART 133 177
IPR000644 CBS_dom ProSiteProfiles 231 290
IPR046342 CBS_dom_sf SUPERFAMILY 57 174
IPR046342 CBS_dom_sf SUPERFAMILY 235 347
IPR000644 CBS_dom ProSiteProfiles 298 357
IPR000644 CBS_dom Pfam 66 112
IPR000644 CBS_dom Pfam 294 335
IPR000644 CBS_dom Pfam 127 170
IPR000644 CBS_dom Pfam 234 281
IPR000644 CBS_dom ProSiteProfiles 130 185
IPR000644 CBS_dom SMART 67 115
IPR000644 CBS_dom SMART 236 283
IPR000644 CBS_dom SMART 301 349
IPR000644 CBS_dom SMART 133 177
IPR000644 CBS_dom ProSiteProfiles 231 290
IPR000644 CBS_dom ProSiteProfiles 64 121
IPR000270 PB1_dom ProSiteProfiles 411 497
IPR000270 PB1_dom Pfam 414 496
IPR000270 PB1_dom SMART 413 497

No CAZYmes available for this sequence

No external refs found!