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  5. Seita.8G059600.1

Seita.8G059600.1


Description : F-box family protein with WD40/YVTN repeat doamin


Gene families : OG_01_0001870 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001870_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G059600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036047 F-box-like_dom_sf SUPERFAMILY 29 86
IPR001680 WD40_rpt SMART 317 357
IPR001680 WD40_rpt SMART 189 229
IPR001680 WD40_rpt SMART 273 314
IPR001680 WD40_rpt SMART 232 270
IPR042627 FBXW2 PANTHER 28 376
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 131 372
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 109 436
IPR001680 WD40_rpt Pfam 288 314
IPR001810 F-box_dom Pfam 36 77
IPR001680 WD40_rpt SMART 317 357
IPR001680 WD40_rpt SMART 189 229
IPR001680 WD40_rpt SMART 273 314
IPR001680 WD40_rpt SMART 232 270
IPR001810 F-box_dom Pfam 36 76
IPR036047 F-box-like_dom_sf SUPERFAMILY 29 86
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 131 372
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 109 436

No CAZYmes available for this sequence

No external refs found!