Seita.8G080000.1

Description : LRR and NB-ARC domains-containing disease resistance protein

Gene families : OG_01_0000069 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000069_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G080000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042197	Apaf_helical	Gene3D	311	394
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	835	858
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	592	616
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	736	758
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	759	782
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	664	688
IPR002182	NB-ARC	Pfam	156	396
IPR001611	Leu-rich_rpt	ProSiteProfiles	837	858
IPR036388	WH-like_DNA-bd_sf	Gene3D	395	479
IPR039203	RGA2/3-like	PANTHER	805	1134
IPR032675	LRR_dom_sf	Gene3D	510	824
IPR041118	Rx_N	Pfam	13	95
IPR006553	Leu-rich_rpt_Cys-con_subtyp	SMART	664	684
IPR006553	Leu-rich_rpt_Cys-con_subtyp	SMART	688	715
IPR006553	Leu-rich_rpt_Cys-con_subtyp	SMART	1177	1204
IPR032675	LRR_dom_sf	Gene3D	828	1080
IPR032675	LRR_dom_sf	Gene3D	1125	1276
IPR027417	P-loop_NTPase	SUPERFAMILY	141	409
IPR027417	P-loop_NTPase	Gene3D	135	305
IPR001611	Leu-rich_rpt	Pfam	666	688
IPR001611	Leu-rich_rpt	Pfam	837	858
IPR001611	Leu-rich_rpt	Pfam	714	736
IPR038005	RX-like_CC	CDD	12	117
IPR001611	Leu-rich_rpt	Pfam	738	757
IPR001611	Leu-rich_rpt	Pfam	644	664
IPR001611	Leu-rich_rpt	Pfam	666	688
IPR002182	NB-ARC	Pfam	155	373
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	835	858
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	592	616
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	736	758
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	759	782
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	664	688
IPR032675	LRR_dom_sf	Gene3D	828	1080
IPR001611	Leu-rich_rpt	ProSiteProfiles	837	858
IPR042197	Apaf_helical	Gene3D	311	394
IPR041118	Rx_N	Pfam	13	95
IPR027417	P-loop_NTPase	Gene3D	135	305
IPR032675	LRR_dom_sf	Gene3D	510	824
IPR006553	Leu-rich_rpt_Cys-con_subtyp	SMART	664	684
IPR006553	Leu-rich_rpt_Cys-con_subtyp	SMART	688	715
IPR006553	Leu-rich_rpt_Cys-con_subtyp	SMART	1177	1204
IPR032675	LRR_dom_sf	Gene3D	1125	1276
IPR027417	P-loop_NTPase	SUPERFAMILY	141	409
IPR036388	WH-like_DNA-bd_sf	Gene3D	395	479

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.8G080000.1

Expression Profile

Co-expression Networks

Functional Annotation