Seita.8G120000.1

Description : Sec23/Sec24 protein transport family protein

Gene families : OG_01_0001904 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001904_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G120000.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006895	Znf_Sec23_Sec24	Pfam	420	458
IPR006900	Sec23/24_helical_dom	Pfam	835	932
IPR007123	Gelsolin-like_dom	Pfam	958	1018
IPR036465	vWFA_dom_sf	SUPERFAMILY	495	735
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	939	1061
IPR036175	Sec23/24_helical_dom_sf	SUPERFAMILY	835	937
IPR006896	Sec23/24_trunk_dom	Pfam	495	735
IPR036465	vWFA_dom_sf	Gene3D	497	737
IPR036174	Znf_Sec23_Sec24_sf	SUPERFAMILY	407	493
IPR036180	Gelsolin-like_dom_sf	SUPERFAMILY	939	1081
IPR012990	Sec23_24_beta_S	Pfam	740	824
IPR006900	Sec23/24_helical_dom	Pfam	835	930
IPR036465	vWFA_dom_sf	SUPERFAMILY	495	735
IPR007123	Gelsolin-like_dom	Pfam	957	1014
IPR036180	Gelsolin-like_dom_sf	SUPERFAMILY	939	1081
IPR012990	Sec23_24_beta_S	Pfam	740	823
IPR036175	Sec23/24_helical_dom_sf	SUPERFAMILY	835	937
IPR006896	Sec23/24_trunk_dom	Pfam	495	735
IPR036465	vWFA_dom_sf	Gene3D	497	737
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	939	1061
IPR036174	Znf_Sec23_Sec24_sf	SUPERFAMILY	407	493
IPR006895	Znf_Sec23_Sec24	Pfam	420	458

No CAZYmes available for this sequence

External Links

No external refs found!

Seita.8G120000.1

Expression Profile

Co-expression Networks

Functional Annotation