Seita.8G146600.1

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_01_0011279 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011279_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G146600.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_115

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002182	NB-ARC	Pfam	216	454
IPR036388	WH-like_DNA-bd_sf	Gene3D	454	533
IPR032675	LRR_dom_sf	Gene3D	988	1186
IPR027417	P-loop_NTPase	Gene3D	195	363
IPR027417	P-loop_NTPase	SUPERFAMILY	202	468
IPR042197	Apaf_helical	Gene3D	368	453
IPR032675	LRR_dom_sf	Gene3D	624	985
IPR044974	Disease_R_plants	PANTHER	558	1065
IPR041118	Rx_N	Pfam	13	103
IPR032675	LRR_dom_sf	Gene3D	624	985
IPR041118	Rx_N	Pfam	12	106
IPR032675	LRR_dom_sf	Gene3D	988	1186
IPR042197	Apaf_helical	Gene3D	368	453
IPR002182	NB-ARC	Pfam	216	453
IPR044974	Disease_R_plants	PANTHER	651	924
IPR044974	Disease_R_plants	PANTHER	2	101
IPR044974	Disease_R_plants	PANTHER	140	645
IPR027417	P-loop_NTPase	SUPERFAMILY	202	468
IPR036388	WH-like_DNA-bd_sf	Gene3D	454	533
IPR027417	P-loop_NTPase	Gene3D	195	363

No CAZYmes available for this sequence

External Links

No external refs found!