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Description : oligouridylate binding protein 1B
Gene families : OG_01_0006273 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006273_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G198900.1 | |
| Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | ISM | GOs from InterProScan |
| MF | GO:0003723 | RNA binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000504 | RRM_dom | Pfam | 55 | 121 |
| IPR000504 | RRM_dom | Pfam | 140 | 210 |
| IPR000504 | RRM_dom | Pfam | 259 | 325 |
| IPR000504 | RRM_dom | ProSiteProfiles | 53 | 127 |
| IPR000504 | RRM_dom | SMART | 139 | 212 |
| IPR000504 | RRM_dom | SMART | 54 | 123 |
| IPR000504 | RRM_dom | SMART | 258 | 327 |
| IPR035979 | RBD_domain_sf | SUPERFAMILY | 52 | 217 |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Gene3D | 1 | 135 |
| IPR000504 | RRM_dom | ProSiteProfiles | 138 | 216 |
| IPR000504 | RRM_dom | ProSiteProfiles | 257 | 331 |
| IPR035979 | RBD_domain_sf | SUPERFAMILY | 249 | 345 |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Gene3D | 136 | 237 |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Gene3D | 238 | 335 |
| IPR000504 | RRM_dom | ProSiteProfiles | 257 | 331 |
| IPR000504 | RRM_dom | SMART | 139 | 212 |
| IPR000504 | RRM_dom | SMART | 54 | 123 |
| IPR000504 | RRM_dom | SMART | 258 | 327 |
| IPR000504 | RRM_dom | Pfam | 140 | 210 |
| IPR000504 | RRM_dom | Pfam | 55 | 121 |
| IPR000504 | RRM_dom | Pfam | 259 | 325 |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Gene3D | 136 | 237 |
| IPR035979 | RBD_domain_sf | SUPERFAMILY | 52 | 217 |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Gene3D | 238 | 335 |
| IPR035979 | RBD_domain_sf | SUPERFAMILY | 249 | 345 |
| IPR000504 | RRM_dom | ProSiteProfiles | 53 | 127 |
| IPR000504 | RRM_dom | ProSiteProfiles | 138 | 216 |
| IPR012677 | Nucleotide-bd_a/b_plait_sf | Gene3D | 1 | 135 |
No CAZYmes available for this sequence
| No external refs found! |