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  5. Seita.8G204600.1

Seita.8G204600.1


Description : polyol/monosaccharide transporter 5


Gene families : OG_01_0002348 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002348_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G204600.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94


Type GO Term Name Evidence Source
MF GO:0015144 carbohydrate transmembrane transporter activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003663 Sugar/inositol_transpt NCBIfam 30 478
IPR036259 MFS_trans_sf SUPERFAMILY 24 480
IPR005829 Sugar_transporter_CS ProSitePatterns 90 106
IPR005828 MFS_sugar_transport-like Pfam 37 483
IPR003663 Sugar/inositol_transpt PRINTS 127 146
IPR003663 Sugar/inositol_transpt PRINTS 384 405
IPR003663 Sugar/inositol_transpt PRINTS 44 54
IPR003663 Sugar/inositol_transpt PRINTS 407 419
IPR003663 Sugar/inositol_transpt PRINTS 294 304
IPR020846 MFS_dom ProSiteProfiles 36 472
IPR005829 Sugar_transporter_CS ProSitePatterns 339 356
IPR036259 MFS_trans_sf Gene3D 28 485
IPR036259 MFS_trans_sf SUPERFAMILY 24 480
IPR005828 MFS_sugar_transport-like Pfam 36 483
IPR020846 MFS_dom ProSiteProfiles 36 472
IPR005829 Sugar_transporter_CS ProSitePatterns 90 106
IPR003663 Sugar/inositol_transpt TIGRFAM 30 478
IPR045262 STP/PLT_plant PANTHER 21 485
IPR005829 Sugar_transporter_CS ProSitePatterns 339 356
IPR036259 MFS_trans_sf Gene3D 28 485
IPR003663 Sugar/inositol_transpt PRINTS 127 146
IPR003663 Sugar/inositol_transpt PRINTS 384 405
IPR003663 Sugar/inositol_transpt PRINTS 44 54
IPR003663 Sugar/inositol_transpt PRINTS 407 419
IPR003663 Sugar/inositol_transpt PRINTS 294 304

No CAZYmes available for this sequence

No external refs found!