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  5. Seita.8G207400.1

Seita.8G207400.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0067591 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0067591_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G207400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 6 82
IPR000504 RRM_dom SMART 107 179
IPR000504 RRM_dom SMART 7 78
IPR000504 RRM_dom Pfam 8 66
IPR000504 RRM_dom Pfam 108 165
IPR000504 RRM_dom ProSiteProfiles 106 183
IPR035979 RBD_domain_sf SUPERFAMILY 4 103
IPR035979 RBD_domain_sf SUPERFAMILY 105 193
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 4 88
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 103 189
IPR000504 RRM_dom Pfam 108 165
IPR000504 RRM_dom Pfam 8 66
IPR000504 RRM_dom ProSiteProfiles 106 183
IPR000504 RRM_dom SMART 107 179
IPR000504 RRM_dom SMART 7 78
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 4 88
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 103 189
IPR034131 DAZAP1_RRM2 CDD 104 183
IPR035979 RBD_domain_sf SUPERFAMILY 4 103
IPR035979 RBD_domain_sf SUPERFAMILY 105 193
IPR000504 RRM_dom ProSiteProfiles 6 82

No CAZYmes available for this sequence

No external refs found!