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  5. Seita.8G221400.1

Seita.8G221400.1


Description : F-box family protein


Gene families : OG_01_0008246 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008246_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G221400.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_155


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032675 LRR_dom_sf Gene3D 431 658
IPR032675 LRR_dom_sf Gene3D 227 430
IPR032675 LRR_dom_sf Gene3D 49 226
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 334 359
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 386 411
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 207 231
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 412 435
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 488 513
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 130 155
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 514 538
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 256 281
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 539 564
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 181 206
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 436 461
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 360 385
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 156 180
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 74 99
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 565 589
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 462 487
IPR001611 Leu-rich_rpt Pfam 412 434
IPR001611 Leu-rich_rpt Pfam 464 485
IPR001611 Leu-rich_rpt Pfam 488 511
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 386 411
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 334 359
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 207 231
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 412 435
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 488 513
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 130 155
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 514 538
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 256 281
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 539 564
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 181 206
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 436 461
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 360 385
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 156 180
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 74 99
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 462 487
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 565 589
IPR001611 Leu-rich_rpt Pfam 464 485
IPR001611 Leu-rich_rpt Pfam 412 434
IPR001611 Leu-rich_rpt Pfam 488 511
IPR001611 Leu-rich_rpt Pfam 334 356
IPR032675 LRR_dom_sf Gene3D 49 226
IPR032675 LRR_dom_sf Gene3D 431 658
IPR032675 LRR_dom_sf Gene3D 227 430

No CAZYmes available for this sequence

No external refs found!