1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.8G247700.1

Seita.8G247700.1


Description : TBP-associated factor 15


Gene families : OG_01_0007253 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007253_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G247700.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 11 94
IPR036443 Znf_RanBP2_sf SUPERFAMILY 134 173
IPR001876 Znf_RanBP2 ProSiteProfiles 213 242
IPR035979 RBD_domain_sf SUPERFAMILY 8 100
IPR001876 Znf_RanBP2 SMART 215 239
IPR001876 Znf_RanBP2 SMART 143 169
IPR001876 Znf_RanBP2 Pfam 216 242
IPR001876 Znf_RanBP2 Pfam 142 171
IPR001876 Znf_RanBP2 ProSitePatterns 217 236
IPR000504 RRM_dom Pfam 14 90
IPR036443 Znf_RanBP2_sf SUPERFAMILY 206 243
IPR001876 Znf_RanBP2 ProSiteProfiles 141 172
IPR001876 Znf_RanBP2 ProSitePatterns 145 166
IPR000504 RRM_dom ProSiteProfiles 12 98
IPR000504 RRM_dom SMART 13 94
IPR001876 Znf_RanBP2 ProSiteProfiles 213 242
IPR001876 Znf_RanBP2 ProSitePatterns 145 166
IPR036443 Znf_RanBP2_sf SUPERFAMILY 134 173
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 11 94
IPR001876 Znf_RanBP2 ProSitePatterns 217 236
IPR000504 RRM_dom ProSiteProfiles 12 98
IPR036443 Znf_RanBP2_sf SUPERFAMILY 206 243
IPR001876 Znf_RanBP2 Pfam 142 171
IPR001876 Znf_RanBP2 Pfam 216 242
IPR000504 RRM_dom SMART 13 94
IPR001876 Znf_RanBP2 ProSiteProfiles 141 172
IPR000504 RRM_dom Pfam 14 90
IPR035979 RBD_domain_sf SUPERFAMILY 8 100
IPR001876 Znf_RanBP2 SMART 215 239
IPR001876 Znf_RanBP2 SMART 143 169

No CAZYmes available for this sequence

No external refs found!