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  5. Seita.8G248100.1

Seita.8G248100.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0019279 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019279_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.8G248100.1
Cluster Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_140


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin Pfam 41 181
IPR001938 Thaumatin ProSiteProfiles 34 232
IPR037176 Osmotin/thaumatin-like_sf Gene3D 34 234
IPR001938 Thaumatin PANTHER 21 187
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 36 232
IPR001938 Thaumatin PIRSF 1 188
IPR001938 Thaumatin PIRSF 178 244
IPR001938 Thaumatin SMART 37 232
IPR001938 Thaumatin ProSiteProfiles 34 232
IPR001938 Thaumatin PANTHER 12 237
IPR001938 Thaumatin PIRSF 1 188
IPR001938 Thaumatin PIRSF 178 244
IPR001938 Thaumatin Pfam 41 180
IPR037176 Osmotin/thaumatin-like_sf Gene3D 34 234
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 36 232
IPR001938 Thaumatin SMART 37 232
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 246 6.5e-21 41 179
No external refs found!