Seita.9G108900.1

Description : GTP-binding protein, HflX

Gene families : OG_01_0004914 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004914_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G108900.1
Cluster	Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032305	GTP-bd_M	Pfam	201	297
IPR006073	GTP-bd	PRINTS	311	331
IPR006073	GTP-bd	PRINTS	378	396
IPR042108	GTPase_HflX_N_sf	Gene3D	116	225
IPR025121	GTPase_HflX_N	Pfam	129	198
IPR030394	G_HFLX_dom	ProSiteProfiles	309	565
IPR016496	GTPase_HflX	PANTHER	36	579
IPR006073	GTP-bd	Pfam	310	432
IPR027417	P-loop_NTPase	SUPERFAMILY	309	440
IPR027417	P-loop_NTPase	Gene3D	309	464
IPR030394	G_HFLX_dom	CDD	262	450
IPR016496	GTPase_HflX	NCBIfam	125	443
IPR016496	GTPase_HflX	PANTHER	46	593
IPR030394	G_HFLX_dom	ProSiteProfiles	309	565
IPR006073	GTP-bd	Pfam	311	432
IPR006073	GTP-bd	PRINTS	311	331
IPR006073	GTP-bd	PRINTS	378	396
IPR030394	G_HFLX_dom	CDD	262	450
IPR016496	GTPase_HflX	TIGRFAM	125	443
IPR027417	P-loop_NTPase	Gene3D	309	464
IPR042108	GTPase_HflX_N_sf	Gene3D	116	225
IPR027417	P-loop_NTPase	SUPERFAMILY	309	440
IPR032305	GTP-bd_M	Pfam	201	297
IPR025121	GTPase_HflX_N	Pfam	129	198

No CAZYmes available for this sequence

External Links

No external refs found!