- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Major facilitator superfamily protein
Gene families : OG_01_0005698 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005698_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica coexpression network - v0.2 (X-meeting 2023): Seita.9G306000.1 | |
| Cluster | Setaria italica HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_82 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | ISM | GOs from InterProScan |
| MF | GO:0022857 | transmembrane transporter activity | ISM | GOs from InterProScan |
| BP | GO:0055085 | transmembrane transport | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036259 | MFS_trans_sf | SUPERFAMILY | 58 | 500 |
| IPR005829 | Sugar_transporter_CS | ProSitePatterns | 376 | 392 |
| IPR036259 | MFS_trans_sf | Gene3D | 57 | 503 |
| IPR003663 | Sugar/inositol_transpt | NCBIfam | 58 | 499 |
| IPR005828 | MFS_sugar_transport-like | Pfam | 68 | 501 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 163 | 182 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 331 | 341 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 404 | 425 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 427 | 439 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 73 | 83 |
| IPR005829 | Sugar_transporter_CS | ProSitePatterns | 168 | 193 |
| IPR020846 | MFS_dom | ProSiteProfiles | 65 | 492 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 163 | 182 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 331 | 341 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 404 | 425 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 427 | 439 |
| IPR003663 | Sugar/inositol_transpt | PRINTS | 73 | 83 |
| IPR005828 | MFS_sugar_transport-like | Pfam | 68 | 501 |
| IPR003663 | Sugar/inositol_transpt | TIGRFAM | 58 | 499 |
| IPR020846 | MFS_dom | ProSiteProfiles | 65 | 492 |
| IPR005829 | Sugar_transporter_CS | ProSitePatterns | 168 | 193 |
| IPR036259 | MFS_trans_sf | SUPERFAMILY | 58 | 500 |
| IPR036259 | MFS_trans_sf | Gene3D | 57 | 503 |
| IPR005829 | Sugar_transporter_CS | ProSitePatterns | 376 | 392 |
No CAZYmes available for this sequence
| No external refs found! |